Commit 5f342293 authored by cermak's avatar cermak
Browse files

First version

- switch from old site (using nunjacks & gulp) to jekyll. Sass is kept.
- switched to mapy api from google maps
parent 411e1abf
Pipeline #4842 failed with stage
in 11 seconds
......@@ -45,7 +45,7 @@ DEPENDENCIES
ruby 2.3.1p112
ruby 2.5.5p157
......@@ -3,117 +3,11 @@
Example [Jekyll] website using GitLab Pages. View it live at
[Learn more about GitLab Pages]( or read the the [official GitLab Pages documentation](
<!-- START doctoc generated TOC please keep comment here to allow auto update -->
**Table of Contents** *generated with [DocToc](*
- [Getting Started](#getting-started)
- [Start by forking this repository](#start-by-forking-this-repository)
- [Start from a local Jekyll project](#start-from-a-local-jekyll-project)
- [GitLab CI](#gitlab-ci)
- [Using Jekyll locally](#using-jekyll-locally)
- [GitLab User or Group Pages](#gitlab-user-or-group-pages)
- [Did you fork this project?](#did-you-fork-this-project)
- [Other examples](#other-examples)
- [Troubleshooting](#troubleshooting)
<!-- END doctoc generated TOC please keep comment here to allow auto update -->
## Getting Started
You can get started with GitLab Pages using Jekyll easily by either forking this repository or by uploading a new/existing Jekyll project.
Remember you need to wait for your site to build before you will be able to see your changes. You can track the build on the **Pipelines** tab.
### Start by forking this repository
1. Fork this repository.
1. **IMPORTANT:** Remove the fork relationship.
Go to **Settings (⚙)** > **Edit Project** and click the **"Remove fork relationship"** button.
1. Enable Shared Runners.
Go to **Settings (⚙)** > **Pipelines** and click the **"Enable shared Runners"** button.
1. Rename the repository to match the name you want for your site.
1. Edit your website through GitLab or clone the repository and push your changes.
### Start from a local Jekyll project
1. [Install][] Jekyll.
1. Use `jekyll new` to create a new Jekyll Project.
1. Add [this `.gitlab-ci.yml`](.gitlab-ci.yml) to the root of your project.
1. Push your repository and changes to GitLab.
This is my personal scientific website.
## GitLab CI
This project's static Pages are built by [GitLab CI][ci], following the steps
defined in [`.gitlab-ci.yml`](.gitlab-ci.yml):
image: ruby:2.3
JEKYLL_ENV: production
- bundle install
- bundle exec jekyll build -d public
- public
- master
## Using Jekyll locally
To work locally with this project, you'll have to follow the steps below:
1. Fork, clone or download this project
1. [Install][] Jekyll
1. Download dependencies: `bundle`
1. Build and preview: `bundle exec jekyll serve`
1. Add content
The above commands should be executed from the root directory of this project.
Read more at Jekyll's [documentation][].
## GitLab User or Group Pages
To use this project as your user/group website, you will need one additional
step: just rename your project to ``, where `namespace` is
your `username` or `groupname`. This can be done by navigating to your
project's **Settings**.
Read more about [user/group Pages][userpages] and [project Pages][projpages].
## Did you fork this project?
If you forked this project for your own use, please go to your project's
**Settings** and remove the forking relationship, which won't be necessary
unless you want to contribute back to the upstream project.
## Other examples
* [jekyll-branched]( demonstrates how you can keep your GitLab Pages site in one branch and your project's source code in another.
* The [jekyll-themes]( group contains a collection of example projects you can fork (like this one) having different visual styles.
## Troubleshooting
1. CSS is missing! That means two things:
* Either that you have wrongly set up the CSS URL in your templates, or
* your static generator has a configuration option that needs to be explicitly
set in order to serve static assets under a relative URL.
This project's static Pages are built by [GitLab CI][ci]
......@@ -6,17 +6,16 @@
# 'jekyll serve'. If you change this file, please restart the server process.
# Site settings
title: Example Jekyll site using GitLab Pages
title: Petr Čermák - scientific researcher
description: > # this means to ignore newlines until "baseurl:"
Write an awesome description for your new site here. You can edit this
line in _config.yml. It will appear in your document head meta (for
Google search results) and in your feed.xml site description.
baseurl: "/jekyll" # the subpath of your site, e.g. /blog
url: "/" # the base hostname & protocol for your site
twitter_username: jekyllrb
github_username: jekyll
gitlab_username: pages
I´m Petr and I do science.
I work in Prague in low temperature magnetic laboratory MGML.
baseurl: "" # the subpath of your site, e.g. /blog
url: "" # the base hostname & protocol for your site
twitter_username: petrscience
github_username: me2d09
gitlab_username: cermp5am
# Outputting
permalink: /:categories/:year/:month/:day/:title
<footer class="site-footer">
<div class="wrapper">
<h2 class="footer-heading">{{ site.title }}</h2>
<div class="footer-col-wrapper">
<div class="footer-col footer-col-1">
<ul class="contact-list">
<li>{{ site.title }}</li>
<li><a href="mailto:{{ }}">{{ }}</a></li>
<div class="footer-col footer-col-2">
<ul class="social-media-list">
{% if site.gitlab_username %}
{% include icon-gitlab.html username=site.gitlab_username %}
{% endif %}
{% if site.github_username %}
{% include icon-github.html username=site.github_username %}
{% endif %}
{% if site.twitter_username %}
{% include icon-twitter.html username=site.twitter_username %}
{% endif %}
<div class="footer-col footer-col-3">
<p>{{ site.description }}</p>
<footer class="c-main-footer js-main-footer">
<div id="contact-map" class="c-main-footer__map">
<div class="c-main-footer__top o-container js-main-footer-top"></div>
<div class="c-main-footer__bottom js-main-footer-bottom">
<p class="c-main-footer__text">Petr Čermák. Copyright 2018-2020.</p>
<script type="text/javascript" src=""></script>
<script type="text/javascript">Loader.load();</script>
<script type="text/javascript">
function newMap(div, x, y) {
var center = SMap.Coords.fromWGS84(x, y);
var m = new SMap(JAK.gel(div), center, 15);
m.addControl(new SMap.Control.Zoom(null, {showZoomMenu :false}), {left:"8px", top:"84px"});
m.addControl(new SMap.Control.Compass(), {left:"8px", top:"8px"});
m.addControl(new SMap.Control.Mouse(SMap.MOUSE_PAN | SMap.MOUSE_ZOOM));
var layer = new SMap.Layer.Marker();
layer.addMarker(new SMap.Marker(center));
newMap("contact-map", 14.4505889, 50.1156942);
\ No newline at end of file
<header class="site-header">
<header class="c-main-header">
<div class="wrapper">
<div class="o-container">
<a class="site-title" href="{{ site.baseurl }}/">{{ site.title }}</a>
<div class="c-main-header__nav-wrapper" data-menuAnimated="true">
<nav class="c-main-nav js-main-nav">
<ul class="c-main-nav__list nav-fixed--is-active js-main-nav__list">
<li class="c-main-nav__item"><a href="#section-about" class="c-main-nav__link" data-navPosition="1"><span>01_</span>about</a></li>
<li class="c-main-nav__item"><a href="#section-education" class="c-main-nav__link" data-navPosition="2"><span>02_</span>education</a></li>
<li class="c-main-nav__item"><a href="#section-research" class="c-main-nav__link" data-navPosition="3"><span>03_</span>research</a></li>
<li class="c-main-nav__item"><a href="#section-publications" class="c-main-nav__link" data-navPosition="4"><span>04_</span>publications</a></li>
<li class="c-main-nav__item"><a href="#section-teaching" class="c-main-nav__link" data-navPosition="5"><span>05_</span>teaching</a></li>
<li class="c-main-nav__item"><a href="#section-contacts" class="c-main-nav__link" data-navPosition="6"><span>06_</span>contacts</a></li>
<div class="c-main-nav__bars js-main-nav-toggle">
<nav class="site-nav">
<a href="#" class="menu-icon">
<svg viewBox="0 0 18 15">
<path fill="#424242" d="M18,1.484c0,0.82-0.665,1.484-1.484,1.484H1.484C0.665,2.969,0,2.304,0,1.484l0,0C0,0.665,0.665,0,1.484,0 h15.031C17.335,0,18,0.665,18,1.484L18,1.484z"/>
<path fill="#424242" d="M18,7.516C18,8.335,17.335,9,16.516,9H1.484C0.665,9,0,8.335,0,7.516l0,0c0-0.82,0.665-1.484,1.484-1.484 h15.031C17.335,6.031,18,6.696,18,7.516L18,7.516z"/>
<path fill="#424242" d="M18,13.516C18,14.335,17.335,15,16.516,15H1.484C0.665,15,0,14.335,0,13.516l0,0 c0-0.82,0.665-1.484,1.484-1.484h15.031C17.335,12.031,18,12.696,18,13.516L18,13.516z"/>
<div id="section-about" class="c-screen-about o-screen-about" data-contentPosition="1">
<div class="o-screen-about__col">
<figure class="c-screen-about__image">
<img src="/assets/pic/hithere.jpg" alt="">
<div class="o-screen-about__col">
<h1 class="u-mb-5">{{ name }}</h1>
<span class="c-screen-about__caption">Scientific researcher, doctor of physics</span>
<ul class="c-socials u-mb-35">
<li class="c-socials__item">
<a href="" class="c-socials__link">
<i class="icofont icofont-brand-linkedin"></i>
<li class="c-socials__item">
<a href="" class="c-socials__link">
<i class="icofont icofont-social-facebook"></i>
<li class="c-socials__item">
<a href="" class="c-socials__link">
<i class="icofont icofont-social-twitter"></i>
<p class="u-mb-10"><span class="u-block">Hello!</span>
I´m Petr and I do science. <br />
I work in Prague in low temperature magnetic laboratory <a href="">MGML</a>.
<!--<p class="u-mb-10">
In my free time I make <a href="">things</a>.
If you are interrested in iot, smart home, loxone, alexa, onion omega, arduino follow to
<b><a href="">my makers blog KUTIL</a></b>.
<div class="trigger">
{% for my_page in site.pages %}
{% if my_page.title %}
<a class="page-link" href="{{ my_page.url | prepend: site.baseurl }}">{{ my_page.title }}</a>
{% endif %}
{% endfor %}
<a class="c-button c-button--bold-text u-mb-30" href="#">download cv</a>-->
<h3 class="u-mb-10">Featured publications:</h3>
<a href=""><p class="u-mb-10" >Petr Čermák et al., <b>PNAS 116</b> (2019) 6695-6700</p></a>
<a href=""><p class="u-mb-10" >B.-Q. Liu, P. Čermák et al., <b>Phys. Rev. B 98</b> (2018) 174306</p></a>
\ No newline at end of file
<a href="{{ include.username }}"><span class="icon icon--github">{% include icon-github.svg %}</span><span class="username">{{ include.username }}</span></a>
<svg viewBox="0 0 16 16"><path fill="#828282" d="M7.999,0.431c-4.285,0-7.76,3.474-7.76,7.761 c0,3.428,2.223,6.337,5.307,7.363c0.388,0.071,0.53-0.168,0.53-0.374c0-0.184-0.007-0.672-0.01-1.32 c-2.159,0.469-2.614-1.04-2.614-1.04c-0.353-0.896-0.862-1.135-0.862-1.135c-0.705-0.481,0.053-0.472,0.053-0.472 c0.779,0.055,1.189,0.8,1.189,0.8c0.692,1.186,1.816,0.843,2.258,0.645c0.071-0.502,0.271-0.843,0.493-1.037 C4.86,11.425,3.049,10.76,3.049,7.786c0-0.847,0.302-1.54,0.799-2.082C3.768,5.507,3.501,4.718,3.924,3.65 c0,0,0.652-0.209,2.134,0.796C6.677,4.273,7.34,4.187,8,4.184c0.659,0.003,1.323,0.089,1.943,0.261 c1.482-1.004,2.132-0.796,2.132-0.796c0.423,1.068,0.157,1.857,0.077,2.054c0.497,0.542,0.798,1.235,0.798,2.082 c0,2.981-1.814,3.637-3.543,3.829c0.279,0.24,0.527,0.713,0.527,1.437c0,1.037-0.01,1.874-0.01,2.129 c0,0.208,0.14,0.449,0.534,0.373c3.081-1.028,5.302-3.935,5.302-7.362C15.76,3.906,12.285,0.431,7.999,0.431z"/></svg>
<a href="{{ include.username }}"><span class="icon icon--gitlab">{% include icon-gitlab.svg %}</span><span class="username">{{ include.username }}</span></a>
<svg viewBox="0 0 16 16" xmlns="" fill-rule="evenodd" clip-rule="evenodd" stroke-linejoin="round" stroke-miterlimit="1.414"><path d="M15.97 9.058l-.895-2.756L13.3.842c-.09-.282-.488-.282-.58 0L10.946 6.3H5.054L3.28.842C3.188.56 2.79.56 2.7.84L.924 6.3.03 9.058c-. 15.37l7.75-5.63c.212-.156.302-.43.22-.682"/></svg>
<a href="{{ include.username }}"><span class="icon icon--twitter">{% include icon-twitter.svg %}</span><span class="username">{{ include.username }}</span></a>
<svg viewBox="0 0 16 16"><path fill="#828282" d="M15.969,3.058c-0.586,0.26-1.217,0.436-1.878,0.515c0.675-0.405,1.194-1.045,1.438-1.809c-0.632,0.375-1.332,0.647-2.076,0.793c-0.596-0.636-1.446-1.033-2.387-1.033c-1.806,0-3.27,1.464-3.27,3.27 c0,0.256,0.029,0.506,0.085,0.745C5.163,5.404,2.753,4.102,1.14,2.124C0.859,2.607,0.698,3.168,0.698,3.767 c0,1.134,0.577,2.135,1.455,2.722C1.616,6.472,1.112,6.325,0.671,6.08c0,0.014,0,0.027,0,0.041c0,1.584,1.127,2.906,2.623,3.206 C3.02,9.402,2.731,9.442,2.433,9.442c-0.211,0-0.416-0.021-0.615-0.059c0.416,1.299,1.624,2.245,3.055,2.271 c-1.119,0.877-2.529,1.4-4.061,1.4c-0.264,0-0.524-0.015-0.78-0.046c1.447,0.928,3.166,1.469,5.013,1.469 c6.015,0,9.304-4.983,9.304-9.304c0-0.142-0.003-0.283-0.009-0.423C14.976,4.29,15.531,3.714,15.969,3.058z"/></svg>
<!DOCTYPE html>
<!doctype html>
<html class="" lang="en">
<meta charset="utf-8">
<meta http-equiv="x-ua-compatible" content="ie=edge">
<title>Petr Čermák - Scientific researcher</title>
<meta name="description" content="I´m Petr and I do science.
I work in Prague in low temperature magnetic laboratory MGML.">
<meta name="viewport" content="width=device-width, initial-scale=1">
{% include head.html %}
<!-- inject:css -->
<!-- endinject -->
<link href=",700,900|Lora:400,400i,700" rel="stylesheet">
<link rel="stylesheet" href="css/main.css" data-pin="/assets/img/icofont-location-pin--gold.png">
{% include header.html %}
<!-- HTML5 Shim and Respond.js IE8 support of HTML5 elements and media queries -->
<!-- WARNING: Respond.js doesn't work if you view the page via file:// -->
<!--[if lt IE 9]>
<script src=""></script>
<script src=""></script>
<!--[if lt IE 10]>
<p class="browserupgrade">You are using an <strong>outdated</strong> browser. Please <a href="">upgrade your browser</a> to improve your experience.</p>
<div class="page-content">
<div class="wrapper">
{{ content }}
<div class="ie-overflow-fix" style="overflow:hidden;">
{% include header.html %}
{{ content }}
{% include footer.html %}
{% include footer.html %}
<script src="/assets/js/jquery.min.js"></script>
<script src="/assets/js/wow.min.js"></script>
<script src="/assets/js/jquery.waypoints.min.js"></script>
<script src="/assets/js/inview.min.js"></script>
<script src="/assets/js/main.js"></script>
layout: post
title: "Welcome to Jekyll!"
date: 2016-03-24 15:32:14 -0300
categories: jekyll update
You’ll find this post in your `_posts` directory. Go ahead and edit it and re-build the site to see your changes. You can rebuild the site in many different ways, but the most common way is to run `jekyll serve`, which launches a web server and auto-regenerates your site when a file is updated.
To add new posts, simply add a file in the `_posts` directory that follows the convention `YYYY-MM-DD-name-of-post.ext` and includes the necessary front matter. Take a look at the source for this post to get an idea about how it works.
Jekyll also offers powerful support for code snippets:
{% highlight ruby %}
def print_hi(name)
puts "Hi, #{name}"
#=> prints 'Hi, Tom' to STDOUT.
{% endhighlight %}
Check out the [Jekyll docs][jekyll-docs] for more info on how to get the most out of Jekyll. File all bugs/feature requests at [Jekyll’s GitHub repo][jekyll-gh]. If you have questions, you can ask them on [Jekyll Talk][jekyll-talk].
* Reset some basic elements
body, h1, h2, h3, h4, h5, h6,
p, blockquote, pre, hr,
dl, dd, ol, ul, figure {
margin: 0;
padding: 0;
* Basic styling
body {
font: $base-font-weight #{$base-font-size}/#{$base-line-height} $base-font-family;
color: $text-color;
background-color: $background-color;
-webkit-text-size-adjust: 100%;
-webkit-font-feature-settings: "kern" 1;
-moz-font-feature-settings: "kern" 1;
-o-font-feature-settings: "kern" 1;
font-feature-settings: "kern" 1;
font-kerning: normal;
* Set `margin-bottom` to maintain vertical rhythm
h1, h2, h3, h4, h5, h6,
p, blockquote, pre,
ul, ol, dl, figure,
%vertical-rhythm {
margin-bottom: $spacing-unit / 2;
* Images
img {
max-width: 100%;
vertical-align: middle;
* Figures
figure > img {
display: block;
figcaption {
font-size: $small-font-size;
* Lists
ul, ol {
margin-left: $spacing-unit;
li {
> ul,
> ol {
margin-bottom: 0;
* Headings
h1, h2, h3, h4, h5, h6 {
font-weight: $base-font-weight;
* Links
a {
color: $brand-color;
text-decoration: none;
&:visited {
color: darken($brand-color, 15%);
&:hover {
color: $text-color;
text-decoration: underline;
* Blockquotes
blockquote {
color: $grey-color;
border-left: 4px solid $grey-color-light;
padding-left: $spacing-unit / 2;
font-size: 18px;
letter-spacing: -1px;
font-style: italic;
> :last-child {
margin-bottom: 0;
* Code formatting
code {
font-size: 15px;
border: 1px solid $grey-color-light;
border-radius: 3px;
background-color: #eef;
code {
padding: 1px 5px;
pre {
padding: 8px 12px;
overflow-x: auto;
> code {
border: 0;
padding-right: 0;
padding-left: 0;
* Wrapper
.wrapper {
max-width: -webkit-calc(#{$content-width} - (#{$spacing-unit} * 2));
max-width: calc(#{$content-width} - (#{$spacing-unit} * 2));
margin-right: auto;
margin-left: auto;
padding-right: $spacing-unit;
padding-left: $spacing-unit;
@extend %clearfix;
@include media-query($on-laptop) {
max-width: -webkit-calc(#{$content-width} - (#{$spacing-unit}));
max-width: calc(#{$content-width} - (#{$spacing-unit}));
padding-right: $spacing-unit / 2;
padding-left: $spacing-unit / 2;
* Clearfix
%clearfix {
&:after {
content: "";
display: table;
clear: both;
* Icons
.icon {
> svg {
display: inline-block;
width: 16px;
height: 16px;
vertical-align: middle;
path {
fill: $grey-color;